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Journal of Environmental Management

Elsevier BV

Preprints posted in the last 30 days, ranked by how well they match Journal of Environmental Management's content profile, based on 11 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.

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From guidelines to practice: Operational criteria for identifying old-growth forests in northern Europe

Monkkonen, M.; Brazaitis, G.; Brumelis, G.; Jonsson, B.-G.; Lohmus, A.; Makipaa, R.; Syrjanen, K.

2026-05-21 ecology 10.64898/2026.05.19.724771 medRxiv
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Primary and old-growth forests are globally valued for their biodiversity, ecosystem services, and cultural significance. The EU Biodiversity Strategy and EU Forest Strategy for 2030 require strict protection of remaining primary and old-growth forests, yet they cover only about 3% of EU forest area and remain highly threatened. The European Commissions guidelines define old-growth forests using three main indicators--native tree species, deadwood, and large/old trees--supported by five complementary indicators. Implementing these indicators for boreal and hemiboreal old-growth forests in northern Europe currently lack science-based operational criteria that meet EU legal standards. We provide recommendations for implementing European Commissions indicators with science-based operational criteria and thresholds to minimize misclassification and ensure cost-effective conservation. Key thresholds include native species dominance, [≥]5% deadwood of the total wood volume, and [≥]20 large/old trees per hectare. Additional guidance is offered for regeneration patterns, structural complexity, microhabitats, and indicator species, emphasizing that all indicators should be applied collectively.

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The effect of atmospheric pollution caused by pheasant Phasianus colchicus releases on the epiphytic flora on trees in sensitive woodlands

Sage, R. B.; Bealey, C.; Woodburn, M. I. A.; Werling, J.; Banks, A. N.; Abrahams, D.; Madden, J.

2026-05-12 ecology 10.64898/2026.05.08.723433 medRxiv
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The release and management of pheasants (Phasianus colchicus) in the UK for recreational shooting exerts a range of effects on the ecosystem into which they are released. We studied possible effect of nutrient deposition on epiphytic tree flora at 20 pheasant release sites distributed through England (18) and Wales (2) during winter and spring 2023/24. Sites were all Ancient Semi-natural Woodlands (ASNWs) and had substantial (600-8000 pheasants) in a single release pen. We measured N-sensitive and N-tolerant indicator bryophyte and lichen species on tree trunks near to the pen and then in plots along a transect 100m, 250m, 500m and 1km+ away from the pen. To achieve a gradient of pheasant use, the transects were located in the opposite direction to the game managed / shooting area. We recorded 1.9 times more coverage of N-tolerant lichens and bryophytes combined on selected tree species at the pen-edge compared to the control plots. The relationship showed a decline from the pen edge to 250m away but then stabilised. We also detected higher levels of coverage of N-sensitive tree flora at 100m and 250 m compared to the penedge plot. These measures were also higher at these mid distances compared to the 500m and 1000m plots. We suggest far plots were nearer wood edges and were affected by ambient inputs of aerial N from farmland and other external sources. The overall interpretation is that concentrations of pheasants in and around release pens for several months from late summer until early winter in ASNWs does affect the balance of N-sensitive and tolerant tree flora up to potentially 250m and this is a consideration when locating release pens in and near to sensitive woods.

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A sea full of measures: EU conservation goals for benthic habitats will require wide-ranging spatial measures

Probst, W. N.

2026-05-14 ecology 10.64898/2026.05.11.724278 medRxiv
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The use of marine space by human activities is globally increasing, resulting in a competition with spatial management measures for marine conservation. Within the European Union (EU) these measures are currently implemented by the union member states to achieve the UN sustainable development goal (SDG) of protecting at least 10 % of the national marine waters. Further, the EU Marine Strategy Framework Directive (MSFD) and the Nature Restoration Regulation (NRL) are the two main legal means for the implementation of ambitious spatial conservation targets for benthic habitat types, which can range from 10 - 90 %. This study analysis how the targets of the MSFD and NRL are currently met in the German waters of the North Sea and which areas the full implementation of both legislations might require. A spatial optimisation tool ("prioritizr" in R) was used to identify optimised solutions for the conservation of up to 75 % of NRL benthic habitats. The current spatial conservation measures (which ban demersal trawling within certain zones of designated marine protected areas, MPA) are not sufficient to reach the targets of the MSFD and NRL. Extending the exclusion of demersal trawling to the entire area of the MPAs would achieve a sufficient coverage for all habitats except for offshore sand and mud habitats. These could be further protected, when including areas for offshore wind farms, where trawling is also banned. However, to date it is unclear, if and how these (or other human use) areas could be included into spatial conservation regimes, a debate that needs to be resolved to allow for the achievement of the ambitious MSFD and NRL targets.

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Modelling the persistence of post-management disturbance in Calluna vulgaris communities

Ritson, J. P.; Bell, B.; Worrall, F.; Evans, M.; Lindsay, R.; Evans, C.

2026-05-14 ecology 10.64898/2026.05.12.724511 medRxiv
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O_LICalluna vulgaris is often managed in the UK by rotational burning, but this practice has recently been banned on peat with depth greater than 30-40 cm. It is unclear how then to manage the large areas of Calluna on blanket bogs used for sport shooting because without managed burning, fuel loads and wildfire risk will increase as the Calluna ages within the artificially narrow age distributions created by burn management. C_LIO_LIWe developed a model of Calluna mortality and management to understand duration and persistence of post-management effects. This allows us to assess how long it will take to reach a more natural age structure which would allow increased diversity if management ceases. C_LIO_LIOur results show that management effects persist for around 50 years depending on site-specific mortality rates. Active management may therefore be needed either to mitigate the elevated risk of severe wildfire or to speed up this transition. C_LIO_LISome studies have employed, as unmanaged analogues, Calluna stands that were last managed <50 years ago, but such studies may have unintentionally biased their results by observing Calluna still in post-management recovery leading to an over-estimation of wildfire risk associated with more natural blanket bogs. C_LIO_LISynthesis and applications: with the banning of burning as a management tool for Calluna on deep peat, alternative management is now likely needed as our model shows it could take around 50 years for the Calluna to reach a more natural age distribution. Mowing can replicate some of the effects of managed burning but requires repeated intervention and may compress the peat surface from repeated machine tracking. Rewetting and Sphagnum reintroduction may offer a more sustainable management approach to lowering Calluna fuel loads and reducing severe wildfire risk by creating wetter sub-optimal conditions for Calluna growth and thereby altering the competitive balance between Sphagnum and Calluna. Further work is needed to assess the efficacy of rewetting in controlling fuel loads and how this varies with climate and local pressures. More broadly, this work highlights the need to quantify the persistence of past management regimes to understand ecological trajectories. C_LI

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Ammonium retention by Amberlite IRC-748 resin: useful for concentration assessments

Zhang, H.; Neidhardt, H.; Seitz, S.; Scholten, T.; Oelmann, Y.

2026-05-07 ecology 10.64898/2026.05.05.722854 medRxiv
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Chelating ion exchange resins are widely used to eliminate metal interferences in the analysis of ammonium (NH4+) in soil extraction solutions. However, their potential to co-adsorb NH4+ remains underexplored. Here, synthetic metal ion solutions containing 6-30 mg L-1 NH4+ and the metal cations Ca2+, Mg2+, Cu2+, Mn2+, and Zn2+ were treated with Amberlite IRC-748 resin. The resin efficiently removed Ca2+ (-42.2%), Mg2+ (-21.1%), Cu2+ (-99.9%), Mn2+ (-56.9%), and Zn2+ (-93.6%). However, NH4+ losses of 2.2-5.6% were observed, indicating concentration-dependent co-adsorption. While these losses may be acceptable for concentration measurements via routine assays such as photometric analysis, they may still affect the accuracy of high-precision N analyses that rely on quantitative NH4+ recovery. This highlights a methodological caveat for resin-treated samples, especially in low-NH4+ environments. We therefore recommend including recovery assessments and correction factors when using chelating resins to improve accuracy in NH4+ quantification.

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Assessing pollinator community recovery in restored agroecosystems using the recovery debt framework

Cano, D.; Perez, A. J.; Martinez-Nunez, C.; Tarifa, R.; Salido, T.; Ruiz, C.; Guitierrez, J. E.; Alcantara, J. M.; Rey, P. J.

2026-05-13 ecology 10.64898/2026.05.08.723832 medRxiv
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Recovery debt (RD) quantifies the interim deficit of biodiversity and function during the recovery process after disturbance. Unlike typical recovery indices derived from data on experimental-control comparisons, RD further considers the target (reference) biodiversity level, modelling the rate at which it is approached over time. However, the application of the RD approach to active restoration has not been explicitly implemented to date. Here, we extend the RD framework to evaluate active ecological restoration in agricultural systems, defining the onset of recovery as the shift from intensive to wildlife-friendly management. We applied this approach to assess short-term pollinator recovery in 14 olive groves across a gradient of farming intensification and landscape complexity in southern Spain. Restoration actions included adopting low-intensity ground cover management and actively restoring field margins. At one, three, and five years post-restoration, we assessed community responses by quantifying bee abundance, species richness, plant-bee network properties, and flower visitation rates. Reference systems were defined by olive groves in complex landscapes with low-intensity herb cover management and organic farming practices. Following restoration, the RD of bee abundance decreased from 71% to 55%. We found no significant effects of pre-intervention agricultural management on RD. Instead, across sites, the reduction of the RD (i.e., recovery) of bee abundance, richness, network connectance and flower visitation rate was strongly mediated by the availability of high-quality semi-natural areas in the surrounding landscape and by the ecological contrast created by restoration interventions at both the farm and floral patch levels. RD for other network metrics showed no significant pattern of variation. Our study demonstrates that wildlife-friendly management and targeted habitat restoration can rapidly reduce recovery debt for bee abundance and function in permanent agroecosystems. However, the recovery of more complex interaction-network properties likely requires longer timescales.

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Phytorisque: an Integrated Assessment Tool for Evaluating the Environmental Risk of Pesticides

Monseur, L.; de Maere, J.-B.; Guillitte, C.; Nihorimbere, G.; Janssens, L.; Bragard, C.

2026-05-04 ecology 10.64898/2026.04.30.721842 medRxiv
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IntroductionThe environmental impacts of pesticides have raised increasing concern, prompting the development of indicators to assess associated risks across ecosystems. Two main categories are generally distinguished: score-based indicators, which aggregate variables into scores, and risk-based indicators, grounded in the definition of risk as the product of hazard and exposure. Although more data-intensive and more complex to implement, risk-based indicators are recognized to better preserve proportionality with actual risk levels. ObjectivesThis study presents Phytorisque, a model based on the exposure-toxicity ratio to monitor risks associated with pesticide use in Walloon agriculture, from farm to regional scales, and to identify the most contributing active substances in support of risk-reduction policies MethodPhytorisque is a hybrid model that combines mechanistic, empirical, and statistical approaches, integrating quantities of active substances, their ecotoxicological characteristics, and their mobility, persistence, and bioaccumulation properties to generate indices specific to different environmental compartments. ResultsThe indices obtained enable comparison across substances, agricultural sectors, years, and management scenarios. The Phytorisque model provides an integrated assessment of risk across environmental compartments. It can monitor risk evolution over the years for policy impacts evaluation, diagnose the most problematic substances and prospect environmental risks associated with the use of chemical phytoproducts. ConclusionsPhytorisque provides an integrated risk assessment approach adapted to temporal monitoring, diagnosis, and forecasting. It is a relevant operational tool for supporting regional strategies aimed at reducing pesticide-related risks. The model is also transferable to other regions through the adaptation of parameters to local conditions and context.

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Recreational climbing alters cliff soil chemistry and plant-associated fungal communities

Garcia Munoz, A.; Krah, F.-S.; Palomar, G.; Lopez-Garcia, A.; Buczek, M.; Lorite, J.; March-Salas, M.

2026-05-16 ecology 10.64898/2026.05.15.725402 medRxiv
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O_LICliffs are environmentally extreme yet biodiversity-rich ecosystems that harbour specialist plants, many endemic and threatened. Plant persistence in these nutrient-poor substrates may depend on tightly linked soil- and root-associated microbial communities, which remain poorly understood. These interactions may become increasingly important with the global expansion of recreational climbing. While physical climbing impacts on vegetation are documented, potential chemical effects, from the use of climbing chalk (magnesium carbonate), on soil properties and plant-associated microbiota remain unknown. C_LIO_LIWe sampled soils and roots beneath cliff-specialist and generalist plants, and unvegetated soils, across climbed and unclimbed routes in northern, central, and southern Spain. Soil physicochemical properties were quantified, fungal communities were characterized using ITS-metabarcoding, and structural equation modelling was used to disentangle direct and indirect effects. C_LIO_LIClimbing increased soil pH and altered soil chemical properties, driving shifts in fungal diversity and functional composition in soil and roots. The relative read abundance of root-associated symbiotrophic fungi declined, whereas arbuscular mycorrhizal fungi and pathogens increased in climbed cliffs. Overall effects were consistent, with cliff-specialist plants mediating nutrient and fungal shifts. C_LIO_LIur findings show that climbing can reshape cliff soil chemistry and fungal communities, with potential cascading consequences for plant functional performance, nutrient dynamics, and ecosystem resilience. C_LI

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Low impact of internal stem decay on forest carbon stocks in fire-prone Pinus ponderosa forests

Hauck, M.; Batsaikhan, G.; Csapek, G.; Rust, S.; Zald, H. S. J.; Dulamsuren, C.

2026-05-20 ecology 10.64898/2026.05.17.725735 medRxiv
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Large old trees are of eminent importance for organic carbon storage in forest ecosystems and thus play a role in mitigating climate change. Such trees also have an increased risk of internal stem decay and tree cavity formation, which promotes biodiversity, but complicates the prediction of their biomass and carbon stocks, which is usually done from stem diameter and tree height data applying allometric biomass functions. Since the extent of internal stem decay is known to vary widely between different forest ecosystems and data from moist temperate forests exhibited low significance of internal stem decay, we studied dry, frequently fire-exposed Pinus ponderosa forests in central Oregon to capture the other climatic extreme of temperate forests. We hypothesized high significance of internal stem decay for stand aboveground tree biomass, as we assumed widespread stem injury from fire. In addition, we tested the hypothesis that far more than the largest 1% of trees are necessary for 50% stand biomass, as this hypothesis is found in the literature, but has been challenged in other studies. We found low biomass loss due to internal stem decay by only ca. 1% suggesting that also for fire-prone temperate forests of western North America, biomass estimates based on allometric regression are reliable. The 1% largest trees-50% stand aboveground biomass hypothesis has to be rejection for our forests as long as only trees of a size are included that noteworthily contribute to stand biomass. This metrics strongly depends on regeneration density, which is not relevant for stand biomass.

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Modifying integrated nursery management through the lens of mycorrhizal ecology improves radiata pine seedling performance and reshapes root mycobiome structure at operational industry scale

Chowdhury, J.; Milne, N.; Wade, M.; Thuaux, B.; Green, P.; Last, I.; Senior, J.; Carnegie, A. J.; Anderson, I. C.; Turnbull, T.; Plett, K. L.; Plett, J. M.

2026-05-07 ecology 10.64898/2026.05.04.722574 medRxiv
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Early management decisions in operational forestry are critical for plantation success because it strongly influences seedling quality at planting. Beyond shaping seedling morphology, nursery inputs can also restructure root-associated fungal communities which has consequences for nutrient acquisition, stress tolerance and disease suppression after planting. In this study, we altered nutrient and fungicide inputs based on mycorrhizal ecological theory and quantified the effects of these treatments on key dimensions of the growth performance of radiata pine seedlings. In parallel, we profiled the root-associated mycobiome, assigning fungal taxa to functional guilds and summarizing their richness, diversity, relative abundance and community structure. Using a composite performance index that integrates the key morphological and health measures into a single response variable, together with conventional statistical models with machine learning approaches, we identified management practises that promote both plant performance and a favourable root fungal community and determined the consistent microbiome changes linked to overall quality of the seedlings. These results suggest that microbial feedback loops occur even in highly managed nursery conditions. More broadly, by combining a composite performance index with predictive modelling, we provide a practical way to test complex management combinations and identify microbiome features associated with high-quality planting stock.

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Impact of Fragmentation on the Metapopulation Structure of wild olive

Abebe, A.; Crego, R.; Eichhorn, M.

2026-05-04 ecology 10.64898/2026.04.30.721863 medRxiv
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Habitat fragmentation disrupts metapopulation dynamics by altering environmental conditions and constraining demographic processes critical for persistence and recruitment. In the dry Afromontane forests of northern Ethiopia, we investigated how natural and anthropogenic drivers affect seedlings, saplings, and mature tree dynamics of Olea europaea subsp. cuspidata across 34 patches. We used dynamic occurrence models to quantify effects of patch area, altitude, browsing, and disturbance. Our results indicate that high disturbance reduces seedling occurrence probability lower disturbance sites has seedling in 30% of survey plots, high disturbance would bring this down to 10% (median = -1.322, 95% CI: -2.703 to -0.283). Disturbance makes seedling less likely to persist, while large patch size help seedling persists (median = -0.93, 9 5 % CrI -1.87 - -0.02). For mature individuals, disturbance was the only significant predictor of occurrence probability, suggesting greater resistance to environmental and spatial variability compared to earlier life stages. These findings emphasize that while mature trees display resilience, the successful regeneration of Olea europaea is constrained by disturbance, but current level of browsing is not a threat. Management strategies for conservation should prioritise reducing disturbance through community engagement and forest stewardship to enhance regeneration potential and ensure long-term population viability.

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When advantage turns into risk: disentangling landscape and behavioural drivers of socioeconomic inequality in Lyme disease risk, Glasgow as a case study

Gandy, S. L.; Plahe, G.; Hall, J.; Watkinson, K.; Guntupalli, S.; Johnson, D.; Birtles, R.; Mavin, S.; Gilbert, L.

2026-05-21 public and global health 10.64898/2026.05.18.26353476 medRxiv
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Introduction: Socioeconomic deprivation is often associated with poorer health outcomes, but some studies suggest the opposite for Lyme disease. Here we test two hypotheses to explain this: differences in (i) local landcover of high risk habitats such as woodlands (landscape hypothesis) and (ii) outdoor recreation in such habitats (behaviour hypothesis). Methods: We analysed reported Lyme disease incidence data for 824 data zones in the city of Glasgow, UK, against deprivation rank (based on indicators relating to income, employment, health, education, crime and housing). We then tested how these relate to woodland cover and indices of urban greenspace usage (per capita and per ha of greenspace). Additionally, we measured Lyme disease hazard (density of infected ticks) in 32 greenspaces and tested relationships with deprivation, woodland and greenspace usage. Results: More advantaged data zones (data zones with low deprivation rank) had higher Lyme disease incidence. These areas had more woodland and woodland cover was positively correlated with both Lyme disease incidence and hazard. Deprivation did not correlate with greenspace usage, nor did greenspace usage correlate with Lyme disease incidence. Intensely used greenspaces had lower infected tick densities, consistent with a human disturbance effect on wildlife that carry ticks. Conclusions: Differences in woodland cover, but not outdoor recreation behaviour, can help explain our finding of higher Lyme disease incidence in more advantaged areas. However, to further test the behaviour hypothesis, we need more detailed data on outdoor recreation activity per capita both locally and in rural areas, as well data on mitigation behaviours.

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How comparable across management goals are grassland monitoring methods?

Messick, H.; Lichtenberg, E. M.

2026-05-20 ecology 10.64898/2026.05.18.726054 medRxiv
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QuestionsEcological monitoring, repeated collection of ecological data, is essential to document how ecosystems respond to change. In grasslands, different vegetation monitoring protocols are used across disciplines, making it difficult to address multiple management objectives or research questions. We asked four questions about how three common vegetation monitoring protocols compare. (1) How do the protocols differ in how they collect data? (2) How do the protocols differ in their utility? (3) In what ways do vegetation measurements quantitatively differ across protocols? (4) What are each protocols strengths? LocationThis study was conducted on working ranches in the Southern Great Plains with vegetation consisting mainly of native forbs and grasses. MethodsWe implemented three protocols at each site: (1) the Rangeland Analysis Platform (RAP), (2) the Grassland Effectiveness Monitoring (GEM) protocol, and (3) a typical pollinator ecology survey protocol. We qualitatively compared each protocols utility and quantitatively compared cover measurements that each produced. ResultsAll three protocols displayed positive associations within cover categories, but differed in actual cover measurements. The RAP protocol, which uses remote sensing, measured the highest total vegetation cover. The GEM protocol, a line-point intercept method, had more capability to capture fine-scale cover patterns. The GEM protocol measured the most bare ground while the Pollinator protocol measured more forb coverage. ConclusionFine-scale methods like the GEM protocol are most appropriate to address objectives that require capturing small patterns that would otherwise be overlooked with methods like quadrats or remote sensing. Remote sensing is advantageous when monitoring large areas or inaccessible land, but may over-estimate cover. The Pollinator protocol is best equipped to address questions regarding flower abundance and richness. Similarities among protocols can facilitate synergy across disciplines for more effective monitoring. We emphasize the importance of denoting a clear scale and scope of monitoring objectives before selecting methods.

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Hydrological balance of a subalpine forest and the effects of fog presence and forest age

Montagnani, L.; Garcia-Santos, G.; Obojes, N.

2026-05-11 ecology 10.64898/2026.05.07.723430 medRxiv
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Subalpine forests in the Alps are fragile ecosystems that play a crucial role in regional water resources and the local climate. These ecosystems are ecologically significant due to their unique biodiversity and vulnerability to climate change. While several components of the hydrological balance have been studied, the interplay between catchment-scale processes and plot-scale drivers such as fog presence and forest age remains insufficiently understood. To address this, we investigated the hydrological balance of a subalpine coniferous forest catchment at the Renon site in the Italian Alps, integrating observations across spatial scales. The study area includes a mosaic of mature and younger regrowth forest, where both interannual and seasonal variability in precipitation and fog presence are pronounced. At the catchment scale, we quantified above-canopy precipitation, evapotranspiration (ET, measured via eddy covariance at the ICOS tower), stream discharge, and soil moisture dynamics. Within the catchment, we characterised water partitioning using sap flow sensors for tree transpiration, throughfall and stemflow collectors with rain gauges above and below the canopy and epiphyte sampling. Mixed fog-rain events frequently coincided with higher throughfall. However, these changes had a minor effect on soil water storage and catchment discharge in the annual water balance, which was nearly closed. At the plot scale, our results show that tree transpiration was higher in the younger forest structure, while canopy interception is a dominant process in water partitioning in the older forest structure, where lichen abundance likely enhances interception. This study highlights the importance of multi-scale monitoring in temperate mountain forests, where forest age influences water partitioning, and fog presence, though not directly quantified, can still contribute to reducing evaporative processes. Such contributions may gain importance under changing climate conditions, albeit less prominently than in tropical or subtropical cloud forests.

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Microbial biodeterioration of eighteenth-century oil paintings in Orosi, Costa Rica, and in vitro evaluation of volatile essential oil components as antimicrobials

Madrigal-Rodriguez, F. M.; Castro-Vargas, P.; Jaikel-Viquez, D.; Cob-Delgado, M.; Marin-Delgado, R.; Alvarez-Quesada, J. A.; Cubero-Campos, M.; Jarquin-Cordero, M.; Espinoza-Valverde, J. A.; Herrera-Sancho, O. A.; Redondo-Solano, M.

2026-05-11 microbiology 10.64898/2026.05.07.723565 medRxiv
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Microbial colonization is a major cause of deterioration in paintings, leading to discoloration, pigment degradation, and loss of structural integrity. While biodeterioration of artworks has been studied in temperate climates, tropical environments remain underexplored despite their high humidity and temperature, which promote microbial growth. This study assessed the microbiological deterioration of two eighteenth-century oil paintings, La Muerte de San Jose and Virgen de Guadalupe, located in Orosis Colonial Church and Religious Art Museum, Costa Rica. Microorganisms were isolated and identified using VITEK(R) 2, microscopy, and MALDI-ToF analysis, and their biofilm-forming capacity was evaluated. Additionally, the antimicrobial activity of six essential oil components was tested using direct and indirect contact assays. Twenty-three bacterial species and fifteen fungal genera were identified, with Bacillus, Staphylococcus, Cladosporium, and Aspergillus among the most common. Notably, La Virgen de Guadalupe displayed the highest microbial diversity, reflected in a high Shannon index, indicative of a more complex microbial community. Several isolates displayed strong biofilm formation, particularly Bacillus subtilis/amyloliquefaciens/vallismortis and Staphylococcus saprophyticus. Linalool exhibited the strongest inhibitory activity, achieving complete bacterial growth inhibition in non-contact assays. Environmental monitoring revealed persistently elevated relative humidity and CO2 levels during the study period. Together, these results reveal the complex microbial ecology of tropical heritage paintings and demonstrate that volatile essential oil components can serve as candidates for low-impact antimicrobial strategies in preventive conservation. ImportanceUnderstanding the microbiological deterioration of cultural heritage in tropical environments is crucial for designing sustainable conservation strategies. While microbial colonization of artworks has been widely studied in temperate regions, data from tropical climates remain limited despite inherently favorable conditions for microbial proliferation. This study integrates microbiological, environmental, and physicochemical analyses to characterize microbial communities colonizing eighteenth-century oil paintings in Orosi, Costa Rica. By combining microbial identification, biofilm quantification, and essential oil biocide testing, it bridges applied microbiology and cultural heritage conservation. The finding that volatile components such as linalool inhibit biofilm-forming bacteria without direct contact highlights their potential as eco-friendly, noninvasive antimicrobial alternatives to conventional biocides. These results expand the understanding of biodeterioration dynamics under tropical conditions and offer a practical framework for developing sustainable, evidence-based conservation protocols that protect both heritage materials and the environment. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=171 SRC="FIGDIR/small/723565v1_ufig1.gif" ALT="Figure 1"> View larger version (98K): org.highwire.dtl.DTLVardef@16cd608org.highwire.dtl.DTLVardef@57aa00org.highwire.dtl.DTLVardef@159fcbeorg.highwire.dtl.DTLVardef@e0363b_HPS_FORMAT_FIGEXP M_FIG O_FLOATNOFigure 0.C_FLOATNO Artistic visualization of the geographical context of the studied artworks and the multidisciplinary analytical approaches applied, highlighting the diversity of microorganisms identified (illustration by Keylin Urena-Alvarado). C_FIG

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Antimicrobial resistant bacteria in wastewater-irrigated Mexican soils and transfer of resistant bacteria from irrigated soils to cilantro plants

Pulami, D.; Bhati, D.; Gallego, S.; Smalla, K.; Luneberg, K.; Siebe, C.; Heyde, B.; Siemens, J.; Glaeser, S. P.

2026-05-17 microbiology 10.64898/2026.05.17.725719 medRxiv
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Agricultural fields in the Mezquital Valley, Mexico, were irrigated with untreated wastewater over several decades. Following the construction of a wastewater treatment plant (WWTP) in Atotonilco de Tula, WWTP effluent is used for irrigation. To evaluate the effects of changed irrigation, a soil incubation experiment was performed. Soils of the Mezquital Valley long-term irrigated with untreated wastewater were irrigated with WWTP influent or effluent, both unspiked and spiked with antibiotics and biocidal compounds and incubated four weeks. We investigated the effects of shifted irrigation on the abundance of cultivable total heterotrophic and resistant bacteria (RB). Additionally, RB were cultivated from Coriandrum sativum (cilantro) sown in soil of the incubation experiment. While wastewater treatment significantly reduced the bacterial abundance in effluent, spiking increased RB abundance in both wastewater types including ciprofloxacin (CIP) RB. Before wastewater addition, all soils contained cultivable RB. Irrigation increased the relative abundance of RB cultivated on Mueller Hinton (MH) agar in Leptosols and Phaeozems, compared to soils prior to wastewater addition irrespective of the water type, but not in Vertisols, suggesting the soil type rather than water qualities influenced the RB abundance. Diverse CIP RB were cultivated including strains of 14 genera of three phyla. Among those, Achromobacter spp. strains related to potentially pathogenic A. spanius originating from soil were abundant in both leaves and roots of cilantro. Our results showed that the implementation of wastewater treatment does not reduce the abundance of cultivable RB in Mezquital Valley soils and cilantro plants. Health risk associated monitoring should include long-term persistent RB colonizing plants cultivated in wastewater irrigated soils.

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Wildlife feeding increases risk of male wild turkeys (Meleagris gallopavo) to hunter harvest

Lashley, M.; Leipold, E.; McDonald, B.; Baruzzi, C.

2026-05-04 ecology 10.64898/2026.04.30.721985 medRxiv
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Wildlife feeding during the wild turkey (Meleagris gallopavo) hunting season is legal in many states within the United States, but hunting turkeys with the aid of bait is unlawful in most states. The most common policy to prevent wildlife feeding from acting as bait is to restrict hunting within a defined radius. However, the effect of wildlife feeders on turkey harvest risk and the effectiveness of distance restrictions on mitigating that influence have not been investigated. During 2024-2025, we used GPS transmitters to track 30 adult male turkeys during the spring hunting season on private land with active feeders in Florida, USA, where hunting turkeys within a 91 m radius of a feeder was unlawful. We used Cox proportional hazard models to link risk of hunter harvest with unique feeders visited daily, number of feeders within a home range, and average morning distance and roosting distance to feeders at multiple temporal scales. Hunters harvested 53% of the tagged turkeys. Risk of hunter harvest increased with the number of unique feeders visited the previous day and after the first three days of hunting season with the number of active feeders within a home range. As distance from the most recent roost site and average morning distance to a feeder decreased, risk of hunter harvest increased. We estimated that risk of hunter harvest would be reduced by over 50% if distance restrictions were increased from 100 m to 200 m, by nearly 75% with an increase from 100 m to 300 m, and by nearly 90% with an increase from 100 m to 500 m. To completely eliminate the influence of wildlife feeders on risk of hunter harvest would require a restriction distance well beyond a 500m radius, which is impractical given that this radius would result in an area twice the average private landowner property size in the region. Thus, if wildlife feeding during the turkey hunting season is to be allowed, it will act as bait, in which case, the acceptable level of its influence as bait can be achieved with the appropriate hunting radius restriction.

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Quaternary ammonium compounds (QACs), QAC resistance genes, and QAC tolerant bacteria in livestock and human waste streams

Lennartz, S.; Aigbekaen, O. E.; Jahraus, A.; Siemens, J.; Mulder, I.; Glaeser, S. P.

2026-05-17 microbiology 10.64898/2026.05.17.725718 medRxiv
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Quaternary ammonium compounds (QACs) are high production volume biocidal compounds increasingly scrutinized for their potential to promote antimicrobial resistance spread. This study compared the release of QACs, QAC resistance indicator genes (qacE/qacE{Delta}1), and QAC tolerant bacteria from livestock and human waste streams into the environment. Five livestock farms with on-farm biogas plants (BGPs), a rural and an urban municipal wastewater treatment plant (WWTP) were studied in parallel. In WWTPs, <1% of incoming QACs were discharged with treated wastewater but 10-20% were transferred to sewage sludge. QAC concentrations in sewage sludge far exceeded those in raw and digested manure. The qacE/qacE{Delta}1 genes were detected in all samples with a higher relative abundance in solid than liquid samples. Relative abundances of QAC tolerant fast growing heterotrophic bacteria cultivated under high nutrient conditions at 37{degrees}C were higher in human than livestock waste streams. Providencia and Pseudomonas dominated the cultivated QAC tolerant bacteria in both systems but showed higher QAC tolerance when originating from human waste streams. Additionally, Enterobacteriaceae with higher QAC tolerance were cultivated from human waste streams. Most QAC tolerant strains carried antibiotic resistances without strong system differences. Only few strains carried the qacE/qacE{Delta}1 gene indicating that other mechanisms must be responsible for the increased QAC tolerance. In conclusion, QACs, qacE/qacE{Delta}1, and viable QAC tolerant bacteria including potential pathogenic bacteria were released from livestock and human waste streams into the environment with highest abundances in a post-pandemic sewage sludge sample. Highlights- QACs most abundant in human waste streams, especially biosolids - Higher relative abundance of QAC tolerant bacteria in human waste streams - Pseudomonas and Providencia dominated QAC tolerant bacteria in both waste streams - Enterobacteriaceae with higher QAC tolerance abundant in human waste streams - Most QAC tolerant strains carried additional antibiotic resistances Environmental implicationMunicipal wastewater treatment plants (WWTPs) and livestock farms are hotspots for antimicrobial resistance (AMR) propagation. We compared the simultaneous occurrence of quaternary ammonium compounds (QACs), resistance genes (RGs), QAC-tolerant bacteria, and their multidrug-resistance status in livestock and human waste streams. QACs, indicators of QAC tolerance and AMR occurred in both systems but were higher in WWTPs, especially sewage sludge. Our findings highlight the need for prudent disinfectant use and enhanced waste treatments to reduce the risks of spreading micropollutants, pathogens, and AMR via organic fertilizers or treated wastewater recycled in circular agricultural practice.

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Persistent Invasion Risk: Modeling the near-Current and Future Distribution of Pterygoplichthys disjunctivus (Weber,1991) across the Philippine Archipelago

Bate, J.-M.; Poblete, A.; Dagamac, N. H.

2026-05-13 ecology 10.64898/2026.05.10.724170 medRxiv
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Philippine freshwater ecosystems are considered one of the most diverse ecosystems harboring numerous fish species. However, in the Philippines, these ecosystems are threatened by invasive species that potentially disrupt ecological balance. In this study, we focused on the vermiculated sailfin catfish Pterygoplichthys disjunctivus, an invasive aquarium species reported in several Philippine aquatic ecosystems. Despite its documented spread, its potential range under a rapidly changing climate remains poorly understood for the country. Hence, in this study, we utilized the MaxEnt model to predict its near-current and future habitat suitability in the Philippines. Using 11 reported occurrences, our model showed high predictive accuracy (AUC = 0.882{+/-} .034, TSS = 0.7394 {+/-} 0.154, SEDI = 0.971 {+/-} 0.019). Across the current and future scenarios, slope was the primary contributor (78.7% - 81.3%), followed by BIO 10 or the mean temperature of the warmest quarter(18% - 27.8%), and flow accumulation (0% - 5.2%). However, for the SSP126 scenario, BIO10 is projected to triple by 2050 (18 - 48%). Current projections identify high-risk regions, particularly central Luzon (Laguna de Bay and Lake Taal), the Cagayan River Valley, and portions of eastern Mindanao (Agusan Marsh and Lake Mainit). Sankey transition analysis confirms a high habitat stability rate (>73%) for high-suitability pixels in both SSPs, indicating persistent invasion risk. Overall, our study provides a framework for invasive species management and contributes to the conservation of Philippine aquatic ecosystems.

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Chemical toxicity of microplastics is stronger than particle effects in D. magna

Mondellini, S.; Schwarzer, M.; Schott, M.; Kiene, M.; Cormier, B.; Ghosh, D.; Loeder, M. G. J.; Agarwal, S.; Wagner, M.; Laforsch, C.

2026-05-14 ecology 10.64898/2026.05.12.724551 medRxiv
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Microplastics (MP) are ubiquitous environmental contaminants with diverse physicochemical characteristics. Many studies have shown that size, shape, and polymer type are responsible for their toxicity, but this also seems to differ among MP from the same plastic type. One parameter likely contributing to these differences is plastic chemicals, a broad class of compounds intentionally or unintentionally added to plastics during their production and manufacturing. However, knowledge on the composition of plastic chemicals and their effects remains scarce. Therefore, to elucidate the chemical aspect of MP toxicity, we exposed Daphnia magna individuals to MP (PET, PBS, and PDLLA), cellulose, extracted particles (eMP), and methanol-based extracts of these particles for 10 days. Chemicals within such extracts were analyzed via GC-MS. This study was conducted with reduced food availability to investigate plastic effects in an environmentally relevant scenario. The introduction of a high-food control suggests that a more realistic feeding regime might exacerbate the plastic effects of the selected treatments. Our results indicated that, depending on the polymer type, plastic chemicals determine MP toxicity, which varies according to the endpoint investigated (i.e., body length, reproduction, levels of ROS and LPO). Body length, in particular, was significantly impaired by PET and PDLLA extracts, whereas reproduction was affected by most treatments. The investigated biochemical parameters (ROS and LPO) were not affected by the exposure. These results suggest that MP toxicity strongly depends on their chemical composition, whereas adverse effects due to physical properties are present independently of chemical composition across all MP types. Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=80 SRC="FIGDIR/small/724551v1_ufig1.gif" ALT="Figure 1"> View larger version (23K): org.highwire.dtl.DTLVardef@3c2d4forg.highwire.dtl.DTLVardef@c2ccd7org.highwire.dtl.DTLVardef@116721dorg.highwire.dtl.DTLVardef@9df888_HPS_FORMAT_FIGEXP M_FIG C_FIG