Journal of Environmental Management
○ Elsevier BV
Preprints posted in the last 30 days, ranked by how well they match Journal of Environmental Management's content profile, based on 13 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.
Mattila, T.; Niemi, J.; Kajasilta, H.; Myllyviita, T.; Vippola, T.; Hockerstedt, L.; Pihlainen, S.; Ekroos, J.
Show abstract
Soil degradation is a widespread challenge that requires a broad response at the individual farm level. To ensure effectivity, the practices should be tailored to the farm context: land manager objectives and farm specific challenges. These have however been difficult to quantify. Here we demonstrate that a workable farm context can be created based on a value survey, open satellite and soil data, and published models for vegetation gross primary productivity and soil erosion. Based on the findings, despite individual differences, farmers value profitability and operational efficiency, but also biodiversity and soil health. At least the regenerative farmers surveyed also value working for the greater good more than maintaining tradition or power. In spite of wide differences in farm production orientation, we also found that each farm also had a broad variation in individual fields GPP. Most fields have a stable GPP level, which is either high or low, and that there is a 2-3-fold difference between the weakest and best producing fields indicating the potential for improving GPP by improving the growing conditions on currently weak fields. In addition, soil loss was found to be highly concentrated in critical source areas, where 10% of the field area contributed to 50% of the soil loss. Overall, open data can be linked to modelling workflows to rapidly produce a decision-making context for farmers. This facilitates benchmarking and co-learning as well as enables land managers and advisors to identify the farm context for planning effective responses to soil degradation.
Awad, A.; Loick, N.; Cardenas, L.; Al-Babili, S.; Tester, M.; Melino, V.
Show abstract
Aims Although ammonia-oxidising archaea (AOA) dominate nitrifier communities in many agricultural soils, the contribution of the less abundant ammonia-oxidising bacteria (AOB) to nitrogen oxide emissions, particularly nitric oxide, remains poorly understood. This study investigated the roles of AOA and AOB in regulating nitric oxide (NO) and nitrous oxide (N2O) emissions from a urea-fertilised grassland soil and evaluated the nitrification inhibitors dicyandiamide (DCD) and 3,4-dimethylpyrazole phosphate (DMPP). Methods A 28-day soil incubation experiment was conducted using a denitrification incubation system to continuously monitor NO and N2O emissions. In parallel, a destructive incubation experiment was performed to determine the dynamics of ammonium (NH-N) and total oxidised nitrogen (TOxN) and to assess changes in the abundance of AOA and AOB following urea application with or without DCD or DMPP. Results AOA accounted for approximately 66% of the total ammonia-oxidising community. Neither inhibitor significantly affected AOA abundance, whereas both suppressed AOB, with DMPP showing stronger and more persistent inhibition than DCD. DMPP reduced NO emissions by 16 to 75%, whereas N2O emissions decreased by only 0.2 to 27%. The greater reduction in NO, together with the preferential suppression of AOB, suggests that low-abundance AOB contributed disproportionately to NO production despite the numerical dominance of AOA. Conclusions These findings suggest that AOB can contribute disproportionately to NO emissions despite their lower abundance relative to AOA. The preferential suppression of AOB by DMPP was associated with a substantial reduction in NO emissions, highlighting AOB-associated processes as a potential target for mitigating reactive N losses from fertilised soils.
Thrift-Cahall, E. M.; Tank, J. L.; Mahl, U. H.; Liddick, M. J.; Badilla-Aguilar, A.; Bibby, K.
Show abstract
Subsurface tile drainage rapidly transports nutrients and biological contaminants to surface waters, yet multi-year evaluations of drainage water management (DWM) effects on nutrients, Escherichia coli, and antibiotic resistance genes (ARGs) remain limited. A paired-field design with high-frequency soil moisture monitoring was used to quantify water yield, dissolved nitrogen, phosphorus, and Escherichia coli (E. coli) over seven and eight water years, and ARGs (tetM, tetW, ermB, sul1) over two years in southern Michigan. Soil moisture at tile depth (~75 cm) was higher under controlled drainage, confirming that DWM increases field water-holding capacity. Compared to the free drainage field, DWM reduced cumulative tile discharge by 43% and annual nutrient yields by 46-83% for nitrate and 12-82% for soluble reactive phosphorus, but effects on ammonium were variable. Average daily nutrient yields declined by ~50% over the study period, driven primarily by managed periods. Nutrient concentrations did not differ between treatments, indicating that yield reductions resulted from decreased water loss. Mean daily E. coli yields declined by 71% over the study period, and concentrations were 46% lower under controlled drainage. Controlled drainage reduced tetM and sul1 ARG concentrations and yields during managed periods and throughout the study; however, sensitivity analyses showed that these effects were strongly influenced by a high-precipitation event. After excluding the event, differences in ARG concentrations were no longer detected, although ARG yields remained 43% lower during managed periods. These findings highlight the potential for DWM to mitigate nutrient, microbial, and antibiotic resistance transport from agricultural drainage systems.
Trisciuc, M.
Show abstract
This paper presents a comparative analysis of the floristic composition and site characteristics of four peat bogs in Bucovina, Romania: Poiana Stampei, Romanesti, Saru Dornei, and Gaina-Lucina. The research was based on phytosociological releves on 25 msq plots and direct field phenological observations, on six field visits from May to August 2026. Vegetation was characterised using the Braun Blanquet method, and floristic similarity between sites was assessed with the Sorensen and Bray Curtis indices. All four plots shared a common core of taxa characteristic of peatland vegetation: Sphagnum spp., Carex rostrata, Drosera rotundifolia, Eriophorum vaginatum, and Vaccinium species. Species richness was 13 taxa at Poiana Stampei, Romanesti, and Saru Dornei, and 12 at Gaina-Lucina. Romanesti and Saru Dornei showed the highest floristic similarity (descriptive values, not statistically tested, given a single releve per site), while Gaina-Lucina differed most markedly, not through species richness, which was similar across sites, but through species identity and through the presence of Betula nana, a glacial relict absent from the other sites. The results provide a descriptive basis for future research on the floristic composition and conservation of these habitats.
Song, J.; Li, Y.
Show abstract
Community-led urban greening may contribute to neighborhood safety, but its relationship with crime remains uncertain. We examined whether Keep Indianapolis Beautiful Project GreenSpaces in Indianapolis were associated with changes in violence and total crime. We used a matched-pair difference-in-differences design comparing funded sites with matched unfunded applicant sites. The primary analysis included 29 matched pairs with two years of pre- and post-grant follow-up. Monthly Part I violent offenses and total crime within 600-m buffers were modeled using Poisson pseudo-maximum likelihood. In the first post-grant year, the violent-crime estimate was lower but imprecise (IRR, 0.903; 95% CI, 0.805-1.014). In the second post-grant year, the relative rate was lower (IRR, 0.830; 95% CI, 0.718-0.961). Total crime estimates showed no clear post-grant change. Additional analyses indicated some sensitivity to spatial scale, but no sustained divergence in pre-grant crime patterns. Analyses of short-term crime dependence showed clear month-to-month persistence in violent crime within sites but limited evidence of stable spatial dependence across nearby sites. Therefore, within the two-year post-grant period examined, Project GreenSpaces was associated most consistently with lower relative violent-crime rates in the second year, while no corresponding decrease was observed for total recorded crime. Longer follow-up is needed to determine whether these patterns persist or change as projects mature.
Boeraeve, F.; Noel, G.; Bortels, J.; Francis, F.; Desgain, M.; Sirami, C.; Vialatte, A.; Caro, G.; Dufrene, M.
Show abstract
The potential of alternative agricultural systems, such as organic or conservation agriculture, for biodiversity restoration has been widely investigated. However, variability of practices within each of these two categories of agricultural system has rarely been accounted for. Furthermore, these systems have most often been studied separately, isolating either organic or conservation agriculture (itself often reduced to a soil tillage reduction), and rarely analyzing these systems side by side. This study attempts to disentangle these multiple interrelationships by sampling carabid beetles in a network of 48 commercial Belgian farms including organic agriculture (OA), conservation agriculture (CA), farms combining the two approaches (OCA) and farms applying conventional practices (CVA). In each farm, we sampled carabids using pitfall and emergence traps in one winter cereal field and collected a detailed description of crop management practices. We found that community composition was primarily structured by seasonality early in the season (March, April) followed by convergence (May, June) driven by the aggregation of the most dominant species. Based on agroecosystem classification, organic certification (i.e., the absence of synthetic pesticide use) exerted a twofold stronger effect than application of conservation agriculture principles (i.e., reduced or no soil tillage) on carabid beetle community composition. Notably, OCA supported carabid assemblages that were structurally distinct from those of CA and CVA. Furthermore, carabid communities associated with OA differed significantly in composition from those of CVA. Observed and estimated species richness were also significantly higher in OCA than in CA and CVA, while OA differed from CVA only for observed richness. Beyond differences among agricultural systems, community responses were associated with specific management practices, which explained nearly a quarter of the compositional variation with significant influence of the duration since organic conversion and the frequency of synthetic pesticide application. Carabid abundances were negatively affected by synthetic pesticides and moldboard ploughing, whereas richness was more strongly related to the time since conversion to OA, cover crops, and organic amendments. Overall, these results position synthetic inputs and time since conversion as the main filters over carabid communities. Our study highlights the importance of jointly considering system level analyses and detailed management practices to better understand the complex relationships between agricultural practices and carabid communities.
Shin-Clayton, S.; Aryawan, A. A. K.; Senior, R. A.; Manica, A.; Buchori, D.; Caliman, J.-P.; Hidayat, P.; Leonardi, M.; Naim, M.; Luke, S. H.; Turner, E. C.
Show abstract
Palm oil is the worlds leading vegetable oil, with production continuing to expand, particularly across Southeast Asia. Within established plantations, conserving and restoring riparian margins can reduce erosion, improve connectivity, and support biodiversity. Simultaneously, climate change is increasing thermal stress within tropical agricultural landscapes, raising the potential importance of riparian buffers as microclimatic refugia, although this has not previously been evaluated. The Riparian Ecosystem Restoration in Tropical Agriculture (RERTA) Project is a long-term Before-After Control-Impact experiment established within oil palm plantations in Riau, Indonesia, to evaluate alternative riparian restoration strategies following plantation replanting. Treatments included passive restoration (retaining mature oil palms and allowing natural regeneration), active restoration (enrichment planting with six native tree species), and a control (replanting immature oil palms to the river edge). Six years after restoration, we assessed vegetation structure using terrestrial laser scanning and thermal stability using temperature loggers and thermal imaging. We also evaluated the long-term temperature buffering capacity of each treatment under current and projected climates using CHELSA climate data and downscaled outputs from multiple General Circulation Models under Shared Socioeconomic Pathway scenarios for 2045 and 2085. Active restoration produced greater structural complexity, a more closed canopy, and cooler, more thermally stable conditions than passive restoration and control treatments. Restored margins also contained significantly more cool surface microhabitats, reducing thermal extremes under both current and future climate scenarios. Our findings demonstrate that active restoration of riparian margins can enhance thermal buffering and create microclimatic refugia for biodiversity within tropical oil palm landscapes. As agricultural intensification and climate change continue to reshape tropical ecosystems, restoring structurally complex riparian vegetation will be critical for sustaining biodiversity and the ecosystem services upon which agricultural production depends.
Abanni, S. I.; Adache, C.; Ekure, B. M.; Omotosho, J.
Show abstract
ObjectivesTo estimate the prevalence of objective peripheral neuropathy, and to test whether self-reported use of personal protective equipment (PPE) is associated with lower neuropathy risk, among adults attending a community hospital in a Nigerian population exposed to both agrochemicals and mining. DesignClinic-based cross-sectional study (June-November 2025), reported per STROBE. SettingInfant Jesus Community Hospital, Ishiagu, Ebonyi State, a community combining smallholder farming with granite and lead-zinc mining. Participants285 adults ([≥]18 years) attending the outpatient screening department; people with known diabetes were excluded. Main outcome measuresPeripheral neuropathy on the Michigan Neuropathy Screening Instrument (MNSI) examination -- an instrument validated in diabetic populations -- defined a priori as an abnormal 10 g monofilament test or absent/reduced ankle reflexes; three alternative case definitions were pre-specified. PPE use was scored 0-12. Associations were estimated by multivariable logistic regression adjusted for age and sex. ResultsThe proportion screening positive was 47.0% (95% CI 41.2-52.8) under the primary definition and ranged from 29.8% to 56.8% across definitions. PPE use was near-absent (89.1% never used gloves; 43.2% used none) and showed no detectable protective association (adjusted OR 0.97 per point, 95% CI 0.88-1.06). Men used PPE more than twice as often as women (55.1% vs 24.5%, p<0.001), yet neuropathy did not differ by sex (41.6% vs 49.5%, p=0.27). Only age was associated with neuropathy (adjusted OR 1.02 per year, p=0.02). ConclusionsNearly half of the adults sampled screened positive for peripheral neuropathy, and protective equipment showed no detectable protective association. Because PPE use was near-absent, the study cannot separate ineffective protection from too little protection to measure, and the cross-sectional design precludes causal inference. The equal burden across sexes despite markedly unequal protective behaviour is consistent with community-wide environmental exposure; reducing the total toxic load is a plausible priority that direct exposure measurement should now test.
Fagbohun, I. R.; Allen, D. C.; Sweetman, J. N.; Hilderbrand, R. H.
Show abstract
Introduction: Despite decades of investment, stream restoration often fails to recover diverse benthic macroinvertebrate communities, as restored reaches tend to remain dominated by pollution-tolerant taxa. This shortfall in recovery is commonly attributed to either poor habitat quality or dispersal limitation of aquatic macroinvertebrate taxa, yet these hypotheses are rarely tested directly. Objectives: We conducted a manipulative field experiment in the eastern Piedmont region (Maryland, USA) within the Chesapeake Bay Watershed to evaluate whether restored streams can support pollution-sensitive taxa when dispersal barriers are removed. Methods: We translocated whole macroinvertebrate communities from three nearby reference streams into three restored streams using standardized habitat substrates and quantified macroinvertebrate survival after 28 days. We also assessed how effective leaf vs rock substrates were for accumulating diverse and abundant macroinvertebrate communities for translocation. Results: Across all sites, 77% of translocated individuals and 16 of 22 taxa sensitive and moderately sensitive to pollution persisted under restored stream conditions, demonstrating that restored reaches can support short-term survival of pollution-sensitive taxa that typically fail to recover. Substrate comparisons revealed that leaf packs accumulated higher macroinvertebrate abundances, whereas both substrates accumulated macroinvertebrate communities with similar taxa richness, EPT richness, and Shannon Diversity. Conclusions: This work suggests that dispersal limitation, rather than unsuitable habitat, may be an underappreciated constraint limiting macroinvertebrate recovery in restored streams. These findings challenge the assumption that habitat restoration alone is sufficient for biological recovery and highlight the potential for whole-community translocations to accelerate recovery and ecological uplift as part of stream restoration practices. Implication for Practice: Our study highlights the need to consider habitat connectivity and dispersal pathways during stream restoration designs. Restoring streams to meet habitat requirements of pollution-sensitive macroinvertebrate taxa may not be sufficient for their populations to recover if these taxa are unable to reach the restored stream. In scenarios where restoring connectivity to source populations is infeasible, whole community translocations may offer a novel restoration tool to overcome dispersal barriers and accelerate biological recovery in restored streams.
Madson, E.; Kapanka, A.; Kwamutakha, S.; Ouma, C.; Sinik, M.; Okoth, B.; Agira, J.; Amondi, C.; Simiyu, S.; Gutema, F.; Sewell, D.; Baker, K.
Show abstract
This study developed a streamlined, sensitive and rapid method for co-detection of low concentrations of Salmonella enterica, Shigella flexneri, Listeria monocytogenes, and pathogenic Escherichia coli from soil. First, autoclaved soil from Iowa with serial dilutions of bacteria to confirm individual species recovery rates on selective agar by qPCR under varying primary enrichment times was used. All pathogens were detected by qPCR of colonies recovered from replicate sterile soils spiked with 10^1 or greater bacteria within 5 hours of enrichment. Shiga toxin expressing E. coli (STEC) and L. monocytogenes were consistently co-recovered in autoclaved and natural soil, pathogen spiking concentration, and secondary enrichment time. S.enterica was consistently recovered at autoclaved and natural concentrations, while S. flexneri detection rates fluctuated. Twenty-three soil samples from Kenyan neighborhoods, with prior evidence of contamination, was compared to qPCR detection at each protocol stage: processing, primary enrichment, secondary enrichment, and selective colony isolation. Detection rates substantially increased for S. enterica, STEC and other pathogenic E. coli after enrichment, with optimal detection rates occurring after secondary enrichment. Testing colonies from selective agar resulted in high false negative rates, possibly reflecting competition from native soil microbiota that was absent in spiked sterile soil experiment. Evaluation of the method with other environmental sample types yielded consistent detection patterns. Evidence suggests a protocol including 24-hour primary enrichment, followed by 24-hour secondary enrichment, and qPCR testing of soil DNA at primary and secondary steps is a reproducible and more expedient method for co-detecting common Enterobacteriaceae and L. monocytogenes pathogens in soil.
Dharmasiri, M. E.; Lindo, Z.; Cameron, E. K.
Show abstract
Soil is one of the most biodiverse habitats on the planet, yet the extent of soil biodiversity knowledge in Canada is unknown. To better understand our knowledge, we systematically mapped soil invertebrate biodiversity knowledge from peer-reviewed literature to identify spatial and taxonomic gaps and to assess whether areas projected to experience different magnitudes of climate change are adequately sampled. A total of 1,176 Canadian sampling locations were identified from 427 articles. We found biases in sampling coverage spatially and in relation to current and projected climatic conditions. The geographic region above 60 degrees North is sparsely sampled. Colder regions (< -0.12 C) and regions receiving the least (< 646.47 mm), moderately high (2268.67 to 2809.40 mm), and high (2809.40 to 3350.14 mm) amounts of precipitation were under sampled. Regions projected to have the smallest (< 0.86 C) and greatest (> 1.59 C) magnitudes in temperature change and regions projected to have moderate (-2.06 to +2.69 mm) to large changes (+2.69 to +7.44 mm) in precipitation were underrepresented. The sampled locations also suffer from taxonomic biases which were skewed toward Nematoda (19%), Annelida (18%), Acari (15%), and Collembola (14%). Our results suggest that methods such as stratified sampling is essential to capture underrepresented regions, taxonomic groups, and an array of current and projected climatic conditions. Additionally, shifting to a multispecies sampling approach is essential for broader soil ecosystem knowledge. Importantly, data from well-sampled areas should be examined to determine how it can be leveraged to advance conservation management of soil invertebrates.
Lopez-Chevalier, H. B.; Avelino Perez, A. N.; Suriel Jaime, J. E.; Garcia Encarnacion, L.; Cabrera-Hernandez, J.
Show abstract
Mangrove reforestation is expanding across the Caribbean, but restoration success is still judged almost exclusively by tree survival and canopy cover. Whether the sediment microbiome, which governs carbon burial and nutrient cycling, follows the recovery of the vegetation remains largely unknown. We combined 16S rRNA gene metabarcoding (V4, Illumina MiSeq) with CHNS elemental analysis, pH and salinity measurements to compare sediment prokaryotic communities along 0-100 cm profiles in a reference, a reforested (Rhizophora mangle plantings since 2019) and an altered mangrove within the Las Dunas de Las Calderas Natural Monument, Dominican Republic (39 cores pooled into 28 depth-resolved composite samples). Reference sediments contained 2.5-5.5-fold more organic carbon (median 7.5% vs 3.0% in altered and 1.3% in reforested sediments), had higher C/N ratios and were less alkaline (pH 8.2 vs 8.8). Reference communities were more diverse and even, and differed in composition from both disturbed stands (pairwise PERMANOVA, R^2 ~ 0.09, adjusted P = 0.0015), whereas reforested and altered communities were statistically indistinguishable (R^2 = 0.04, P = 0.25). Disturbed sediments were dominated by Cyanobacteriota (~41-45% of reads), which tracked high pH, whereas reference sediments were enriched in Chloroflexota, Thermodesulfobacteriota and Thermoproteota, lineages linked to anaerobic degradation of complex organic matter and sulfate reduction. Depth structured communities by separating surface from subsurface layers, and sediment organic carbon and nitrogen were the only significant constraints in distance-based redundancy analysis. These results indicate that, within a few years of the first plantings (2019), reforestation had not restored the carbon-rich, anaerobic sediment habitat of the reference forest. We propose sediment organic carbon and microbial community structure as complementary indicators for mangrove restoration monitoring in the Caribbean.
Bhattacharya, A.; Hiremath, S.; Nagarajan, D.; Ghosh, T.
Show abstract
Groundwater contamination by lead and nitrate exceeding the permissible limits of the World Health Organization (WHO) and the Bureau of Indian Standards (BIS) of 10 ppb lead and 45 to 50 ppm nitrate poses a severe health risk of systemic toxicity in humans and animals. Microbial nitrate reduction coupled with microbiologically induced calcite precipitation (MICP) proved to be a novel bioremediation strategy to transform soluble lead nitrate into insoluble lead biominerals. This study presents statistical optimization of operational parameters for nitrate reduction and co-precipitation of biogenic lead carbonate-calcium carbonate by nitrate-reducing bacterial consortia. The SEM, TEM with SEAD, and XRD analysis of the biomineral confirmed lead carbonate co-precipitation with CaCO3. A two-level factorial design was applied to screen significant variables and interactive factors that influence nitrate reduction and biomineral precipitation. The highest nitrate reduction, maximum ammonia production, and biogenic Pb-mineralization efficiency of > 90% were obtained at the optimum conditions (initial nitrate requirement of 600 ppm, temperature 37 oC, pH 8, and carbon content of 5.5 g/L) compared to those obtained under the common process parameters. ANOVA with a high correlation coefficient (R2 > 0.99) corroborated the linear model for the biogenic mineralization process. This study on the biogenic removal of Pb by nitrate-reducing bacterial consortia revealed possible opportunities for large-scale treatment of Pb-contaminated surface and subsurface water bodies.
Malcherczyk-Bies, N.; Sierka, E.
Show abstract
Extensive green roofs are an important component of urban green infrastructure. However, harsh rooftop conditions, including shallow substrates, high temperatures and limited water availability, considerably restrict plant selection. Although extensive green roofs are traditionally dominated by succulent species, increasing attention has been directed towards annual plants because of their rapid establishment, developmental plasticity and potential contribution to vegetation diversity. This review aimed to identify annual plant species introduced on extensive green roofs and to characterize the functional traits most frequently associated with their establishment under rooftop conditions. In addition, the review examined the geographical distribution and methodological characteristics of existing studies and identified species with potential for application under temperate climatic conditions. A total of 22 studies published between 2015 and 2025 were analyzed, comprising 100 annual species representing 29 plant families. The reviewed studies showed a clear geographical bias towards Mediterranean and arid regions, whereas temperate climates were considerably underrepresented. Among species occurring in Central Europe, ruderal life strategies, drought avoidance, efficient dispersal mechanisms, low plant height and prolonged flowering were the most frequently observed functional characteristics, while seed mass and specific leaf area (SLA) exhibited substantial interspecific variation. These findings suggest that functional traits, rather than taxonomic affiliation alone, provide a useful framework for selecting annual species for extensive green roofs. The review also highlights the need for long-term studies conducted under temperate climatic conditions to improve evidence-based plant selection and support the development of resilient and multifunctional green roof vegetation.
Umbach, A. K.; Ikert, O.; Choquet, B.; Neufeld, J. D.
Show abstract
Biological filtration in newly established aquaria depends on the establishment of nitrifying microorganisms that prevent accumulation of toxic ammonia and nitrite. Many aquarists use commercial nitrifying supplements to accelerate biofilter establishment and reduce ammonia and nitrite accumulation. However, the microbial composition and in situ efficacy of these products remain poorly characterized. We evaluated the ability of enrichment cultures containing comammox Nitrospira (CX) and the ammonia-oxidizing archaeon Ca. Nitrosotenuis aquarius (AQ) to serve as aquarium nitrifying supplements, tested alongside a conventional supplement (CS) containing ammonia-oxidizing bacteria. Inoculation of new aquaria containing zebrafish (Danio rerio) with nitrifying supplements resulted in distinct nitrifier profiles within biofilters of each treatment group corresponding with significant reductions in peak ammonia and nitrite concentrations, which were most evident when applied at the maximum tested supplement dose. Treating aquaria with CX, AQ, or CS maintained ammonia and nitrite at low concentrations, and CX effectively prevented ammonia and nitrite accumulation through all stages of aquarium operation and biofilter establishment. After removing all fish from the aquaria, ammonia "spike-in" experiments demonstrated biofilters treated with CX and AQ conferred long-term protection against nitrite accumulation following acute ammonia loading events. Whereas 16S rRNA gene sequences associated with CS were rarely detected within biofilter profiles, those associated with CX and AQ established early and persisted temporally. Overall, results demonstrate how nitrifiers might be differentially adapted to home aquarium conditions and the potential of AOA and comammox Nitrospira to improve biofilter establishment and maintaining safe water quality in newly established freshwater aquaria.
Sanchez-Garcia, D.; Cerda, X.; Angulo, E.
Show abstract
BACKGROUND: The Argentine ant (Linepithema humile) is among the world's worst invasive species. In the Donana Biological Reserve (Spain), it is associated with human structures that provide the mild, moist conditions it needs within the hot, dry scrubland. We evaluated a habitat-modification treatment, predicting that removing this suitable habitat would eradicate the invader locally. Over an 18-year period, we monitored ant communities at a treated and an untreated site, at different distances from the human structures, before and after treatment, and analysed how temperature and worker numbers affected encounters at baits between the Argentine ant and native ants. RESULTS: Distance to the human structures shaped ant communities at both sites, but only the treated site changed after treatment. There, the Argentine ant decreased close to the human structure and almost disappeared farther from it, whereas the endemic Cataglyphis tartessica and C. floricola recovered, especially close to the structure. At baits, the outcome of encounters depended mainly on how temperature changes favoured each species relative to its maximum activity temperature: Cataglyphis spp. displaced the Argentine ant in the morning, as temperature increased, and the Argentine ant recovered the baits in the late afternoon. Numerical advantage favoured only the Argentine ant. CONCLUSION: Habitat modification reduced the Argentine ant and allowed endemic ants to recover, but did not eradicate the invader, which persisted at low abundance 13 years after treatment. In protected areas, habitat management should be combined with eradication, monitoring and prevention of spread.
Tomar, S.; Tolle, M. H.; Vos, M.
Show abstract
Climate change will alter habitat suitability for plant communities in mountain ecosystems of the Western Himalaya. There will be contrasting magnitudes and spatial configurations of these changes for different plant species, and it is an important question how to translate these contrasts into effective climate-proof multi-species conservation planning. This study assessed current habitat associations and projected changes in suitable habitat for two contrasting species, Meconopsis aculeata and Rhododendron campanulatum, in Himachal Pradesh, India. Field surveys and spatially filtered occurrence records were combined with MaxEnt modelling using 10 non-collinear environmental predictors. Habitat suitability was projected to 2050 and 2070 under Shared Socioeconomic Pathways; SSP1-2.6, SSP2-4.5 and SSP5-8.5 using HadGEM3-GC31-LL. Field observations showed contrasting habitat associations, with M. aculeata occurring mainly in open alpine herbaceous communities and R. campanulatum in subalpine woody communities. Elevation was an important predictor for both species while climatic predictors contributed differently to their relative importance and response patterns. Future projections indicated reductions in suitable habitat of approximately 25% for M. aculeata and 27-28% for R. campanulatum. Habitat-change maps showed heterogeneous patterns of loss, gain and persistence rather than uniform contraction, and centroid displacement remained small (7.7-8.5 km). We performed proximity analyses to show which currently suitable areas are most close to areas of future gain, in order to support the design of climate-proof protected areas. We discuss how interspecific differences in response are relevant to multi-species conservation planning that considers the spatial relationship between current high-suitability areas and the gain, loss and redistribution of future suitable habitat.
Horn, N.; Nunes, G. T.
Show abstract
Environmental concerns and the need to mitigate the effects of climate change have driven the adoption of renewable energy sources, such as offshore wind farms (OWFs), making it essential to assess their overlap with seabird habitats to estimate potential impacts. This study is the first to estimate the vulnerability of coastal and seabirds to OWFs at a national scale by integrating biological trait data from the literature, spatial occurrence records from citizen science platforms, and expert knowledge (elicited from 23 specialists) into established quantitative risk frameworks. Collision risk and susceptibility scores were calculated at the family and subfamily levels, as well as disturbance and displacement indices by species and susceptibility by state. The groups with the highest collision risk and susceptibility were Fregatidae (0.354; 0.486), Sulidae (0.199; 0.419), Sterninae (0.190; 0.384) and Diomedeidae (0.190; 0.416). The extreme risk for Fregatidae is driven by their specific flight characteristics, with impacts concentrated in the highly frequented southeast and northeast regions. Regarding disturbance and displacement, Limnodromus griseus exhibited the highest national score (MMA: 0.098), while Diomedea dabbenena had the highest global score (IUCN: 0.092), highlighting the critical need to integrate both regional and global conservation statuses. Spatially, the state exhibiting the highest overall vulnerability to OWF impacts was Rio Grande do Sul (23.78; 10.69), a critical hotspot characterized by high species richness and oceanographic productivity. These findings establish an indispensable national baseline for Marine Spatial Planning, reinforcing the need for targeted pre-installation assessments, the identification of sentinel species, and spatially differentiated management during environmental licensing processes.
Demetriades, P. H.; Brown, A.; Jones, J. L.; Ni Chadhain, S. M.; Carmichael, R. H.; Kiel Reese, B.
Show abstract
Coastal waters often experience fecal contamination from human (e.g., septic systems, wastewater treatment catchments and outfalls) and non-human (e.g., wildlife, domesticated pets, and livestock) origins, posing human health risks through contaminated fisheries and recreational waters. Quantitative PCR (qPCR) methods can identify and quantify fecal origins for their management by targeting Bacteroides, a dominant group of gastrointestinal bacteria with high host specificity. This study identified major contributors and drivers of fecal contamination to Mobile Bay, Alabama, an urbanized estuary in the southern United States. We utilized a multi-species qPCR source tracking approach targeting total Bacteroides and human-, pig-, dog-, cow-, and fowl-associated Bacteroides. Water samples and environmental parameters were collected over one year from 13 sites that represent a range of potential fecal inputs common to coastal waters. Human-associated feces were a consistent major contributor to the system (positive in 82% of samples), with localized inputs from pig (wild or domestic) and dog. Freshwater discharge and nitrogen constituents were good predictors of Bacteroides concentrations in this system, while areas with impervious surfaces and developed land cover may be contributing elevated fecal indicator levels. The multi-species qPCR source tracking approach described in this study can be implemented in other watersheds to support the development of better detection, identification, and fecal management strategies for community health of coastal areas.
Ellis Soto, D.; Crespo-Perez, V.; Pike, C. L.; Cabrera, F.; Penafiel, C.; Pierre-Paul, H.; Dutton, C. L.; Blake, S.; Post, D. M.; Subalusky, A. L.
Show abstract
Animal movements can transport materials across ecosystem boundaries, while simultaneously modifying habitats through physical engineering. We integrated GPS telemetry, camera trapping, sediment measurements and physicochemical sampling of ponds on Santa Cruz Island, Galapagos, to evaluate how giant tortoises connect and shape terrestrial and freshwater ecosystems. Telemetry revealed 2,254 visits by 21 tortoises to 12 ponds, with visits lasting up to 21.38 h and showing strong seasonal and diel variation, while camera traps showed peak pond use in January and during early morning and late afternoon. Greater tortoise abundance was associated with higher ammonium, dissolved organic carbon and total phosphorus concentrations, while ponds with persistently greater tortoise abundance had higher total suspended solids. Departing tortoises carried a mean 505.9 g of sediment, yielding a conservative potential export of 8.20 kg per tortoise per year and tens of tonnes annually. These findings identify giant tortoises as mobile zoogeochemical engineers linking terrestrial and freshwater ecosystems through physical and biogeochemical pathways.